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Document quand l'auteur est "Villemur, Richard"

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Ragot, Rose; Lessard, Florence; Bélanger, André et Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937 (2023). Assessment of multiple fecal contamination sources in surface waters using environmental mitochondrial DNA metabarcoding The Science of the total environment , vol. 898 , nº 165237. pp. 1-11. DOI: 10.1016/j.scitotenv.2023.165237.

Fronton, Fanny; Ferchiou, Sophia; Caza, France; Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937; Robert, Dominique et St-Pierre, Yves ORCID logoORCID: https://orcid.org/0000-0002-1948-2041 (2023). Insights into the circulating microbiome of Atlantic and Greenland halibut populations: the role of species-specific and environmental factors Scientific Reports , vol. 13 , nº 5971. pp. 1-15. DOI: 10.1038/s41598-023-32690-6.

Ferchiou, Sophia; Caza, France; Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937; Labonne, Jacques et St-Pierre, Yves ORCID logoORCID: https://orcid.org/0000-0002-1948-2041 (2023). Skin and Blood Microbial Signatures of Sedentary and Migratory Trout (Salmo trutta) of the Kerguelen Islands Fishes , vol. 8 , nº 4:174. pp. 1-18. DOI: 10.3390/fishes8040174.

Ragot, Rose et Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937 (2022). eDNA profiling of mammals, birds, and fish of surface waters by mitochondrial metagenomics: application for source tracking of fecal contamination in surface waters Environmental Monitoring and Assessment , vol. 194 , nº 2:72. pp. 1-13. DOI: 10.1007/s10661-021-09668-w.

Ragot, Rose et Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937 (2022). Influence of temperature and water quality on the persistence of human mitochondrial DNA, human Hf183 Bacteroidales, fecal coliforms and enterococci in surface water in human fecal source tracking context The Science of the Total Environment , vol. 838 , nº pt1. DOI: 10.1016/j.scitotenv.2022.156025.

Ferchiou, Sophia; Caza, France; Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937; Betoulle, Stéphane et St-Pierre, Yves ORCID logoORCID: https://orcid.org/0000-0002-1948-2041 (2022). Species- and site-specific circulating bacterial DNA in Subantarctic sentinel mussels Aulacomya atra and Mytilus platensis Scientific Reports , vol. 12 , nº 9547. pp. 1-14. DOI: 10.1038/s41598-022-13774-1.

Ferchiou, Sophia; Caza, France; Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937; Betoulle, Stéphane et St-Pierre, Yves ORCID logoORCID: https://orcid.org/0000-0002-1948-2041 (2022). Species- and site-specific circulating bacterial DNA in Subantarctic sentinel mussels Aulacomya atra and Mytilus platensis Scientific Reports , vol. 12 , nº 9547. pp. 1-14. DOI: 10.1038/s41598-022-13774-1.

Cucaita, Alexandra; Piochon, Marianne et Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937 (2021). Co-culturing Hyphomicrobium nitrativorans strain NL23 and Methylophaga nitratireducenticrescens strain JAM1 allows sustainable denitrifying activities under marine conditions PeerJ , vol. 9 , nº e12424. pp. 1-26. DOI: 10.7717/peerj.12424.

Hachad, Mounia; Lanoue, Martine; Duy, Sung Vo; Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937; Sauvé, Sébastien; Prévost, Michèle et Dorner, Sarah (2021). Locating illicit discharges in storm sewers in urban areas using multi-parameter source tracking: Field validation of a toolbox composite index to prioritize high risk areas The Science of the Total Environment , vol. 811 , nº 152060. pp. 1-10. DOI: 10.1016/j.scitotenv.2021.152060.

Hajj-Mohamad, Mariam; Hachad, Mounia; Deschamps, Guy; Sauvé, Sébastien; Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937; Blais, Marc-André; Prévost, Michèle et Dorner, Sarah (2019). Fecal contamination of storm sewers: Evaluating wastewater micropollutants, human-specific Bacteroides 16S rRNA, and mitochondrial DNA genetic markers as alternative indicators of sewer cross connections Science of The Total Environment , vol. 659 . pp. 548-560. DOI: 10.1016/j.scitotenv.2018.12.378.

Payette, Geneviève; Geoffroy, Valérie; Martineau, Christine et Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937 (2019). Dynamics of a methanol-fed marine denitrifying biofilm: 1-Impact of environmental changes on the denitrification and the co-occurrence of Methylophaga nitratireducenticrescens and Hyphomicrobium nitrativorans PeerJ , vol. 7 , nº e7497. pp. 1-22. DOI: 0.7717/peerj.7497.

Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937; Payette, Geneviève; Geoffroy, Valérie; Mauffrey, Florian et Martineau, Christine (2019). Dynamics of a methanol-fed marine denitrifying biofilm: 2-impact of environmental changes on the microbial community PeerJ , vol. 7 , nº e7467. pp. 1-32. DOI: 10.7717/peerj.7467.

Brown, Peter; RELISH, Consortium; Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937 et Zhou, Yuxin (2019). Large expert-curated database for benchmarking document similarity detection in biomedical literature search Database , vol. 2019 , nº baz085. pp. 1-66. DOI: 10.1093/database/baz085.

Caza, France; Joly de Boissel, Philippine Granger; Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937; Betoulle, Stéphane et St-Pierre, Yves ORCID logoORCID: https://orcid.org/0000-0002-1948-2041 (2019). Liquid biopsies for omics-based analysis in sentinel mussels PLoS One , vol. 14 , nº 10. pp. 1-16. DOI: 10.1371/journal.pone.0223525.

Geoffrey, Valérie; Payette, Geneviève; Mauffrey, Florian; Lestin, Livie; Constant, Philippe ORCID logoORCID: https://orcid.org/0000-0003-2739-2801 et Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937 (2018). Strain-level genetic diversity of Methylophaga nitratireducenticrescens confers plasticity to denitrification capacity in a methylotrophic marine denitrifying biofilm. PeerJ , vol. 6 , nº e4679. pp. 1-25. DOI: 10.7717/peerj.4679.

Mauffrey, Florian; Cucaita, Alexandra; Constant, Philippe ORCID logoORCID: https://orcid.org/0000-0003-2739-2801 et Villemur, Richard (2017). Denitrifying metabolism of the methylotrophic marine bacterium Methylophaga nitratireducenticrescens strain JAM1 PeerJ , vol. 5 , nº e4098. pp. 1-22. DOI: 10.7717/peerj.4098.

Laprade, Natacha; Cloutier, Michel; Lapen, David R.; Topp, Edward; Wilkes, Graham; Villemur, Richard et Khan, Izhar U. H. (2016). Detection of virulence, antibiotic resistance and toxin (VAT) genes in Campylobacter species using newly developed multiplex PCR assays Journal of Microbiological Methods , vol. 124 . pp. 41-47. DOI: 10.1016/j.mimet.2016.03.009.

Whiteduck Léveillée, Kerri; Whiteduck Léveillée, Jenni; Cloutier, Michel; Tambong, James T.; Xu, Renlin; Topp, Edward; Arts, Michael T.; Chao, Jerry; Adam, Zaky; Lévesque, C. André; Lapen, David R.; Villemur, Richard et Khan, Izhar U. H. (2016). Identification, characterization and description of Arcobacter faecis sp nov., isolated from a human waste septic tank Systematic and Applied Microbiology , vol. 39 , nº 2. pp. 93-99. DOI: 10.1016/j.syapm.2015.12.002.

Whiteduck Léveillée, Jenni; Cloutier, Michel; Topp, Edward; Lapen, David R.; Talbot, Guylaine; Villemur, Richard et Khan, Izhar U. H. (2016). Development and evaluation of multiplex PCR assays for rapid detection of virulence-associated genes in Arcobacter species Journal of Microbiological Methods , vol. 121 . pp. 59-65. DOI: 10.1016/j.mimet.2015.12.017.

Villemur, Richard; Imbeau, Marianne; Vuong, Nguyet-Minh; Masson, Luke et Payment, Pierre (2015). An environmental survey of surface waters using mitochondrial DNA from human, bovine and porcine origin as fecal source tracking markers Water Research , vol. 69 . pp. 143-153. DOI: 10.1016/j.watres.2014.10.063.

Whiteduck Léveillée, Kerri; Whiteduck Léveillée, Jenni; Cloutier, Michel; Tambong, James T.; Xu, Renlin; Topp, Edward; Arts, Michael T.; Chao, Jerry; Adam, Zaky; Lévesque, C. André; Lapen, David R.; Villemur, Richard; Talbot, Guylaine et Khan, Izhar U. H. (2015). Arcobacter lanthieri sp. nov., isolated from pig and dairy cattle manure International Journal of Systematic and Evolutionary Microbiology , vol. 65 , nº 8. pp. 2709-2716. DOI: 10.1099/ijs.0.000318.

Martineau, Christine; Mauffrey, Florian et Villemur, Richard (2015). Comparative Analysis of Denitrifying Activities of Hyphomicrobium nitrativorans, Hyphomicrobium denitrificans, and Hyphomicrobium zavarzinii Applied and Environmental Microbiology , vol. 81 , nº 15. pp. 5003-14. DOI: 10.1128/aem.00848-15.

Villemur, Richard; Juteau, Pierre; Bougie, Véronique; Ménard, Julie et Déziel, Éric ORCID logoORCID: https://orcid.org/0000-0002-4609-0115 (2015). Development of four-stage moving bed biofilm reactor train with a pre-denitrification configuration for the removal of thiocyanate and cyanate Bioresource Technology , vol. 181 . pp. 254-62. DOI: 10.1016/j.biortech.2015.01.051.

Mauffrey, Florian; Martineau, Christine et Villemur, Richard (2015). Importance of the Two Dissimilatory (Nar) Nitrate Reductases in the Growth and Nitrate Reduction of the Methylotrophic Marine Bacterium Methylophaga nitratireducenticrescens JAM1 Frontiers in Microbiology , vol. 6 . DOI: 10.3389/fmicb.2015.01475.

Martineau, Christine; Villeneuve, Céline; Mauffrey, Florian et Villemur, Richard (2014). Complete Genome Sequence of Hyphomicrobium nitrativorans Strain NL23, a Denitrifying Bacterium Isolated from Biofilm of a Methanol-Fed Denitrification System Treating Seawater at the Montreal Biodome Genome Announcements , vol. 2 , nº 1. e01165-13. DOI: 10.1128/genomeA.01165-13.

Sarker, Pallab; Pilote, Alexandre; Auffret, Marc; Proulx, Émilie; Villemur, Richard; Deschamps, Marie-Helene et Vandenberg, Grant (2014). Reducing geosmin off-flavor compounds and waste outputs through dietary phosphorus management in rainbow trout aquaculture Aquaculture Environment Interactions , vol. 6 , nº 1. pp. 105-117. DOI: 10.3354/aei00119.

Villemur, Richard; Dos Santos, Silvia Cristina Cunha; Ouellette, Julianne; Juteau, Pierre; Lépine, François et Déziel, Éric (2013). Biodegradation of endocrine disruptors in solid-liquid two-phase partitioning systems by enrichment cultures Applied and Environmental Microbiology , vol. 79 , nº 15. pp. 4701-4711. DOI: 10.1128/aem.01239-13.

Villeneuve, Céline; Martineau, Christine; Mauffrey, Florian et Villemur, Richard (2013). Methylophaga nitratireducenticrescens sp. nov. and Methylophaga frappieri sp. nov., isolated from the biofilm of the methanol-fed denitrification system treating the seawater at the Montreal Biodome International Journal of Systematic and Evolutionary Microbiology , vol. 63 , nº Pt 6. pp. 2216-2222. DOI: 10.1099/ijs.0.044545-0.

Ouellette, Julianne; Dos Santos, Silvia Cristina Cunha; Lépine, François; Juteau, Pierre; Déziel, Éric et Villemur, Richard (2013). High absorption of endocrine disruptors by Hytrel: Towards the development of a two-phase partitioning bioreactor Journal of Chemical Technology and Biotechnology , vol. 88 , nº 1. pp. 119-125. DOI: 10.1002/jctb.3864.

Lalande, Jonathan; Villemur, Richard et Deschênes, Louise (2013). A New Framework to Accurately Quantify Soil Bacterial Community Diversity from DGGE Microbial Ecology , vol. 66 , nº 3. pp. 647-658. DOI: 10.1007/s00248-013-0230-3.

Vuong, Nguyet-Minh; Villemur, Richard; Payment, Pierre; Brousseau, Roland; Topp, Edward et Masson, Luke (2013). Fecal source tracking in water using a mitochondrial DNA microarray Water Research , vol. 47 , nº 1. pp. 16-30. DOI: 10.1016/j.watres.2012.09.011.

Martineau, Christine; Villeneuve, Céline; Mauffrey, Florian et Villemur, Richard (2013). Hyphomicrobium nitrativorans sp. nov., isolated from the biofilm of a methanol-fed denitrification system treating seawater at the Montreal Biodome International Journal of Systematic and Evolutionary Microbiology , vol. 63 , nº Pt 10. pp. 3777-3781. DOI: 10.1099/ijs.0.048124-0.

Auffret, Marc; Yergeau, Étienne; Pilote, Alexandre; Proulx, Émilie; Proulx, Daniel; Greer, Charles W.; Vandenberg, Grant et Villemur, Richard (2013). Impact of water quality on the bacterial populations and off-flavours in recirculating aquaculture systems FEMS Microbiology Ecology , vol. 84 , nº 2. pp. 235-247. DOI: 10.1111/1574-6941.12053.

Villemur, Richard (2013). The pentachlorophenol-dehalogenating Desulfitobacterium hafniense strain PCP-1 Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences , vol. 368 , nº 1616. p. 20120319. DOI: 10.1098/rstb.2012.0319.

Bisaillon, Ariane; Beaudet, Réjean; Lépine, François; Déziel, Éric et Villemur, Richard (2010). Identification and characterization of a novel CprA reductive dehalogenase specific to highly chlorinated phenols from Desulfitobacterium hafniense strain PCP-1 Applied and Environmental Microbiology , vol. 76 , nº 22. pp. 7536-7540. DOI: 10.1128/AEM.01362-10.

Lafortune, Isabelle; Juteau, Pierre; Déziel, Éric; Lépine, François; Beaudet, Réjean et Villemur, Richard (2009). Bacterial diversity of a consortium degrading high-molecular-weight polycyclic aromatic hydrocarbons in a two-liquid phase biosystem Microbial Ecology , vol. 57 , nº 3. pp. 455-468. DOI: 10.1007/s00248-008-9417-4.

Villemur, Richard et Déziel, Éric (2005). Phase variation and antigenic variation In: Advances in Molecular and Cellular Microbiology. Dynamic Bacterial Genome (8). Cambridge University Press, New York, pp. 277-321.

Déziel, Éric; Lépine, François; Milot, Sylvain et Villemur, Richard (2003). rhlA is required for the production of a novel biosurfactant promoting swarming motility in Pseudomonas aeruginosa: 3-(3-hydroxyalkanoyloxy)alkanoic acids (HAAs), the precursors of rhamnolipids Microbiology , vol. 149 , nº 8. pp. 2005-2013. DOI: 10.1099/mic.0.26154-0.

Gauthier, Eric; Déziel, Éric; Villemur, Richard; Juteau, Pierre; Lépine, François et Beaudet, Réjean (2003). Initial characterization of new bacteria degrading high-molecular weight polycyclic aromatic hydrocarbons isolated from a 2-year enrichment in a two-liquid-phase culture system Journal of Applied Microbiology , vol. 94 , nº 2. pp. 301-311. DOI: 10.1046/j.1365-2672.2003.01835.x.

Lépine, François; Déziel, Éric; Milot, Sylvain et Villemur, Richard (2002). Liquid chromatographic/mass spectrometric detection of the 3-(3-hydroxyalkanoyloxy)alkanoic acid precursors of rhamnolipids in Pseudomonas aeruginosa cultures Journal of Mass Spectrometry , vol. 37 , nº 1. pp. 41-46. DOI: 10.1002/jms.244.

Villemur, Richard; Déziel, Éric; Benachenhou, Amine; Marcoux, José; Gauthier, Emilie; Lépine, François; Beaudet, Réjean et Comeau, Yves (2000). Two-liquid-phase slurry bioreactors to enhance the degradation of high-molecular-weight polycyclic aromatic hydrocarbons in soil Biotechnology Progress , vol. 16 , nº 6. pp. 966-972. DOI: 10.1021/bp000118j.

Déziel, Éric; Lépine, François; Milot, Sylvain et Villemur, Richard (2000). Mass spectrometry monitoring of rhamnolipids from a growing culture of Pseudomonas aeruginosa strain 57RP Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids , vol. 1485 , nº 2-3. pp. 145-152. DOI: 10.1016/s1388-1981(00)00039-1.

Marcoux, José; Déziel, Éric; Villemur, Richard; Lépine, François; Bisaillon, Jean-Guy et Beaudet, Réjean (2000). Optimization of high-molecular-weight polycyclic aromatic hydrocarbons' degradation in a two-liquid-phase bioreactor Journal of Applied Microbiology , vol. 88 , nº 4. pp. 655-662. DOI: 10.1046/j.1365-2672.2000.01011.x.

Déziel, Éric; Lépine, François; Dennie, Danielle; Boismenu, Daniel L; Mamer, Orval A et Villemur, Richard (1999). Liquid chromatography/mass spectrometry analysis of mixtures of rhamnolipids produced by Pseudomonas aeruginosa strain 57RP grown on mannitol or naphthalene Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids , vol. 1440 , nº 2-3. pp. 244-252. DOI: 10.1016/s1388-1981(99)00129-8.

Dennie, Danielle; Gladu, Isabelle; Lépine, François; Villemur, Richard; Bisaillon, Jean-Guy et Beaudet, Réjean (1998). Spectrum of the reductive dehalogenation activity of desulfitobacterium frappieri PCP-1 Applied and Environmental Microbiology , vol. 64 , nº 11.

Déziel, Éric; Comeau, Yves et Villemur, Richard (1998). Two-liquid-phase bioreactors for enhanced degradation of hydrophobic/toxic compounds Biodegradation , vol. 10 , nº 3. pp. 219-233. DOI: 10.1023/a:1008311430525.

Dagher, Fadi; Déziel, Éric; Lirette, Patricia; Paquette, Gilles; Bisaillon, Jean-Guy et Villemur, Richard (1997). Comparative study of five polycyclic aromatic hydrocarbon degrading bacterial strains isolated from contaminated soils Canadian Journal of Microbiology , vol. 43 , nº 4. pp. 368-377.

Déziel, Éric; Paquette, Gilles; Villemur, Richard; Lépine, François et Bisaillon, Jean-Guy (1996). Biosurfactant production by a soil Pseudomonas strain growing on polycyclic aromatic hydrocarbons Applied and Environmental Microbiology , vol. 62 , nº 6. pp. 1908-1912.

Nguyen, Thuy Thang; Déziel, Éric; Nicastro, Gianlucca G.; Lépine, François et Villemur, Richard . Caractérisation de variants phénotypiques de Pseudomonas aeruginosa capable de croître sur de l'hexadécane In: 8e édition, Congrès Armand-Frappier 2013, 14-16 novembre 2013, Orford (Québec).

Martellini, Anouk; Villemur, Richard et Payment, Pierre . Différenciation des sources de pollutions fécales humaines et animales dans l'eau: utilisation de marqueurs géniques In: 3e édition, Congrès INRS-Institut Armand Frappier 2003, 6-8 novembre 2003, Stoneham.

Auclair, Julie; Parent, Serge et Villemur, Richard . Diversité des bactéries dénitrifiantes méthylotrophes d'un biofilm éliminant les nitrates en eau salée au biodôme de Montréal In: Congrès Armand-Frappier 2009, 6e édition, 5-7 novembre 2009, Bromont.

Laurin, Véronique; Labbé, Normand; Parent, Serge et Villemur, Richard . Effet de différentes sources de carbone et de différents rapports C/N sur l'activité dénitrifiante et la diversité microbienne en milieu marin. In: 3e édition, Congrès INRS-Institut Armand Frappier 2003, 6-8 novembre, Stoneham.

Mauffrey, Florian; Martineau, Christine; Villeneuve, Céline et Villemur, Richard . Étude d'une bactérie dénitrifiante du Biodôme de Montréal In: 8e édition, Congrès Armand-Frappier 2013, 14-16 novembre 2013, Orford (Québec).

Payette, Geneviève; Martineau, Christine; Mauffrey, Florian et Villemur, Richard . Étude sur la dynamique de dénitrification et la diversité bactérienne d’un biofilm dénitrifiant retrouvé au Biodôme de Montréal In: Congrès Armand-Frappier 2013, 8e édition, 14-16 novembre 2013, Orford.

Le Guillouzer, Servane; Mauffrey, Florian; Villemur, Richard et Déziel, Éric . HmqR, un régulateur global de l’expression génique chez la bactérie Burkholderia thailandensis In: 9e édition, Congrès Armand-Frappier 2015, 12-14 novembre 2015, Orford (Québec).

Imbeau, Marianne; Locas, Annie; Payment, Pierre; Vuong, Nguyet-Minh; Masson, Luke et Villemur, Richard . Identification des sources de pollution fécale dans les eaux de surface par détection de l'ADN mitochondrial comme marqueur spécifique d'espèce. In: Congrès Armand-Frappier 2009, 6e édition, 5-7 novembre 2009, Bromont.

Constant, Philippe; Poissant, Laurier et Villemur, Richard . Impact de l'évolution de la microflore microbienne d'un marécage sur les flux d'hydrogène, monoxyde de carbone, méthane et bioxyde de carbone In: 3e édition, Congrès INRS-Institut Armand Frappier 2003, 6-8 novembre 2003, Stoneham.

Mauffrey, Florian et Villemur, Richard . Methylophaga nitratireducenticrescens JAM1, un acteur principal de la dénitrification chez un biofilm marin In: 9e édition, Congrès Armand-Frappier 2015, 12-14 novembre 2015, Oxford (Québec).

Ouellette, Julianne; Lacoste-Caron, Germain; Santoso, Silvia; Déziel, Éric; Juteau, Pierre; Lépine, François; Beaudet, Réjean et Villemur, Richard . Mise au point d'un bioprocédé à deux phases liquides pour la dégradation de modulateurs endocriniens. In: Congrès Armand-Frappier 2009, 6e édition, 5-7 novembre 2009, Bromont.

Fronton, Fanny; Ferchiou, Sophia; Villemur, Richard ORCID logoORCID: https://orcid.org/0000-0001-9768-8937 et St-Pierre, Yves ORCID logoORCID: https://orcid.org/0000-0002-1948-2041 . Première caractérisation du microbiome circulant du flétan de l’Atlantique et du flétan du Groenland du Golfe du Saint-Laurent In: 89e édition du congrès de l’Acfas, 9-13 mai 2022, virtuel et Université Laval.

Blais, Marc-André; Vazquez, Karla; Deschamps, Guy; Dorner, Sarah; Payment, Pierre et Villemur, Richard . Suivi de l’origine de la contamination fécale dans la grande région de Montréal In: 8e édition, Congrès Armand-Frappier 2013, 14-16 novembre 2013, Orford (Québec).

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