Document quand l'auteur est "Perreault, Jonathan"

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Chenal, Martin; Rivera-Millot, Alex; Harrison, Luke B; Khairalla, Ahmed S; Nieves, Cécilia; Bernet, Eve; Esmaili, Mansoore; Belkhir, Manel; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et Veyrier, Frédéric ORCID: https://orcid.org/0000-0002-8574-0547 (2025). Discovery of the widespread site-specific single-stranded nuclease family Ssn Nature Communications , vol. 16 , nº 2388. pp. 1-15. DOI: 10.1038/s41467-025-57514-1.

Kapadia, Jay Bhakti; Daoud, Jamal et Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 (2025). Enzyme-free temperature resilient amplification assay with toehold stem-loop probe Analyst , vol. ahead of p . pp. 1-10. DOI: 10.1039/d4an01212g. (Sous Presse)

Yurdusev, Emre; Trahan, Pierre-Luc et Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 (2024). Adaptation of a Model Spike Aptamer for Isothermal Amplification-Based Sensing Sensors , vol. 24 , nº 21. pp. 1-15. DOI: 10.3390/s24216875.

Lécuyer, Eric; Sauvageau, Martin; Kothe, Ute; Unrau, Peter J; Damha, Masad J; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319; Abou Elela, Sherif; Bayfield, Mark; Claycomb, Julie et Scott, Michelle S (2024). Canada's contributions to RNA research: past, present and future perspectives Biochimie et biologie cellulaire , vol. ahead . DOI: 10.1139/bcb-2024-0176. (Sous Presse)

Najeh, Sabrine; Zandi, Kasra; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et Kharma, Nawwaf (2023). Computational design and experimental verification of pseudoknotted ribozymes RNA , vol. 29 , nº 6. pp. 764-776. DOI: 10.1261/rna.079148.122. (Sous Presse)

Lei, Yuting; Ossonon, Benjamin D; Trahan, Pierre-Luc; Chen, Jiyun; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et Tavares, Ana C (2023). Electrochemically Exfoliated Graphene Oxide for Simple Fabrication of Cocaine Aptasensors ACS applied materials & interfaces , vol. 15 , nº 29. pp. 35580-35589. DOI: 10.1021/acsami.3c03777.

Korniakova, Vesta; Devinck, Aurélie; Groleau, Marie-Christine; Déziel, Éric ORCID: https://orcid.org/0000-0002-4609-0115 et Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 (2022). Fluoride-Controlled Riboswitch-Based Dampening of Gene Expression for Cloning Potent Promoters Frontiers in Genetics , vol. 12 , nº 591543. pp. 1-11. DOI: 10.3389/fgene.2021.591543.

Boutet, Émilie; Djerroud, Samia et Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 (2022). Small RNAs beyond Model Organisms: Have We Only Scratched the Surface? International Journal of Molecular Sciences , vol. 23 , nº 8:4448. pp. 1-14. DOI: 10.3390/ijms23084448.

Davis, Alen Nellikulam; Samlali, Kenza; Kapadia, Jay Bhakti; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319; Shih, Steve C. C. et Kharma, Nawwaf (2021). Digital Microfluidics Chips for the Execution and Real-Time Monitoring of Multiple Ribozymatic Cleavage Reactions ACS Omega , vol. 6 , nº 35. pp. 22514-22524. DOI: 10.1021/acsomega.1c00239.

Lei, Yuting; Ossonon, Benjamin D; Chen, Jiyun; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et Tavares, Ana C (2021). Electrochemical characterization of graphene-type materials obtained by electrochemical exfoliation of graphite Journal of Electroanalytical Chemistry , vol. 887 , nº 115084. pp. 1-9. DOI: 10.1016/j.jelechem.2021.115084.

Hou, Lijuan; Xie, Jin; Wu, Yaoyao; Wang, Jiaojiao; Duan, Anqi; Ao, Yaqi; Liu, Xuejiao; Yu, Xinmei; Yang, Hui Ying; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et Li, Sanshu (2021). Identification of 11 candidate structured noncoding RNA motifs in humans by comparative genomics BMC Genomics , vol. 22 , nº 164. pp. 1-14. DOI: 10.1186/s12864-021-07474-9.

Janik, Monika; Hamidi, Seyed Vahid; Koba, Marcin; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319; Walsh, Ryan; Bock, Wojtek J. et Smietana, Mateusz (2021). Real-time isothermal DNA amplification monitoring in picoliter volumes using an optical fiber sensor Lab on a Chip , vol. 21 , nº 2. pp. 397-404. DOI: 10.1039/d0lc01069c.

Kapadia, Jay Bhakti; Kharma, Nawwaf; Davis, Alen Nellikulam; Kamel, Nicolas et Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 (2021). Toehold mediated strand displacement to measure released product from self-cleaving ribozymes RNA , vol. 28 , nº 2. pp. 263-273. DOI: 10.1261/rna.078823.121.

Nehdi, Atef; Samman, Nosaibah; Aguilar-Sánchez, Vanessa; Farah, Azer; Yurdusev, Emre; Boudjelal, Mohamed et Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 (2020). Novel Strategies to Optimize the Amplification of Single-Stranded DNA Frontiers in Bioengineering and Biotechnology , vol. 8 , nº 401. pp. 1-13. DOI: 10.3389/fbioe.2020.00401.

Naghdi, Mohammad Reza; Boutet, Émilie; Mucha, Clarisse; Ouellet, Jocelyn et Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 (2020). Single Mutation in Hammerhead Ribozyme Favors Cleavage Activity with Manganese over Magnesium Noncoding RNA , vol. 6 , nº 14. pp. 1-10. DOI: 10.3390/ncrna6010014.

Hamidi, Seyed Vahid et Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 (2019). Simple rolling circle amplification colorimetric assay based on pH for target DNA detection Talanta , vol. 201 . pp. 419-425. DOI: 10.1016/j.talanta.2019.04.003.

Celebanska, Anna; Chiniforooshan, Yasser; Janik, Monika; Mikulic, Predrag; Sellamuthu, Balasubramanian; Walsh, Ryan; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et Bock, Wojtek J. (2019). Label-free cocaine aptasensor based on a long-period fiber grating Optics Letters , vol. 44 , nº 10. pp. 2482-2485. DOI: 10.1364/OL.44.002482.

Greschner, Andrea; Ropagnol, Xavier; Kort, Mohamed; Zuberi, Nabilah; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319; Razzari, Luca; Ozaki, Tsuneyuki ORCID: https://orcid.org/0000-0001-8857-3900 et Gauthier, Marc A. (2019). Room-Temperature and Selective Triggering of Supramolecular DNA Assembly/Disassembly by Nonionizing Radiation Journal of the American Chemical Society , vol. 141 , nº 8. pp. 3456-3469. DOI: 10.1021/jacs.8b10355.

Celebanska, Anna; Chiniforooshan, Yasser; Janik, Monika; Mikulic, Predrag; Sellamuthu, Balasubramanian; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et Bock, Wojtek J. (2019). Bioinspired Carbohydrate-Decorated Long-Period Fiber Grating for Label-Free Bacteria Detection. IEEE Sensors Journal , vol. 19 , nº 24. pp. 11965-11971. DOI: 10.1109/JSEN.2019.2939279.

Naghdi, Mohammad Reza; Smail, Katia; Wang, Joy X.; Wade, Fallou; Breaker, Ronald R. et Perreault, Jonathan (2017). Search for 5'-leader regulatory RNA structures based on gene annotation aided by the RiboGap database Methods , vol. 117 . pp. 3-13. DOI: 10.1016/j.ymeth.2017.02.009.

Thamri, Amal; Létourneau, Myriam; Djboulian, Alex; Chatenet, David; Déziel, Éric ORCID: https://orcid.org/0000-0002-4609-0115; Castonguay, Annie ORCID: https://orcid.org/0000-0001-5705-6353 et Perreault, Jonathan (2017). Peptide modification results in the formation of a dimer with a 60-fold enhanced antimicrobial activity PLoS One , vol. 12 , nº 3. : e0173783: 1-12. DOI: 10.1371/journal.pone.0173783.

Chauvier, Adrien; Picard-Jean, Frédéric; Berger-Dancause, Jean-Christophe; Bastet, Laurène; Naghdi, Mohammad Reza; Dubé, Audrey; Turcotte, Pierre; Perreault, Jonathan et Lafontaine, Daniel A. (2017). Transcriptional pausing at the translation start site operates as a critical checkpoint for riboswitch regulation Nature Communications , vol. 8 , nº 13892. pp. 1-12. DOI: 10.1038/ncomms13892.

Kharma, Nawwaf; Varin, Luc; Abu-Baker, Aida; Ouellet, Jonathan; Najeh, Sabrine; Ehdaeivand, Mohammad-Reza; Belmonte, Gabriel; Ambri, Anas; Rouleau, Guy et Perreault, Jonathan (2016). Automated design of hammerhead ribozymes and validation by targeting the PABPN1 gene transcript Nucleic Acids Research , vol. 44 , nº 4. pp. 1-12. DOI: 10.1093/nar/gkv1111.

Li, Jun; Cai, Ang; Ding, Libin; Sellamuthu, Balasubramanian et Perreault, Jonathan (2015). Aerobic sludge granulation in a Reverse Flow Baffled Reactor (RFBR) operated in continuous-flow mode for wastewater treatment Separation and Purification Technology , vol. 149 . pp. 437-444. DOI: 10.1016/j.seppur.2015.04.045.

Jean-Pierre, Fabrice; Perreault, Jonathan et Déziel, Éric ORCID: https://orcid.org/0000-0002-4609-0115 (2015). Complex autoregulation of the post-transcriptional regulator RsmA in Pseudomonas aeruginosa Microbiology , vol. 161 , nº 9. pp. 1889-96. DOI: 10.1099/mic.0.000140.

Pham, Hanh T.; Jousset, Françoise-Xaviere; Perreault, Jonathan; Shike, Hiroko; Szelei, Jozsef; Bergoin, Max et Tijssen, Peter (2013). Expression Strategy of Aedes albopictus Densovirus Journal of Virology , vol. 87 , nº 17. pp. 9928-9932. DOI: 10.1128/JVI.01259-13.

Chapalain, Annelise; Vial, Ludovic; Laprade, Natacha; Dekimpe, Valérie; Perreault, Jonathan et Déziel, Éric (2013). Identification of quorum sensing-controlled genes in Burkholderia ambifaria Microbiologyopen , vol. 2 , nº 2. pp. 226-242. DOI: 10.1002/mbo3.67.

Hammann, Christian; Luptak, Andrej; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et De La Peña, Marcos (2012). The ubiquitous hammerhead ribozyme RNA , vol. 18 , nº 5. pp. 871-885. DOI: 10.1261/rna.031401.111.

Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319; Weinberg, Zasha; Roth, Adam; Popescu, Olivia; Chartrand, Pascal; Ferbeyre, Gerardo et Breaker, Ronald R. (2011). Identification of hammerhead ribozymes in all domains of life reveals novel structural variations PLoS Computational Biology , vol. 7 , nº 5. pp. 1-13. DOI: 10.1371/journal.pcbi.1002031.

Weinberg, Zasha; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319; Meyer, Michelle M. et Breaker, Ronald R. (2009). Exceptional structured noncoding RNAs revealed by bacterial metagenome analysis Nature , vol. 462 , nº 7273. pp. 656-659. DOI: 10.1038/nature08586.

Nehdi, Atef; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319; Beaudoin, Jean-Denis et Perreault, Jean-Pierre (2007). A novel structural rearrangement of hepatitis delta virus antigenomic ribozyme Nucleic Acids Research , vol. 35 , nº 20. pp. 6820-6831. DOI: 10.1093/nar/gkm674.

Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319; Perreault, Jean-Pierre et Boire, Gilles (2007). Ro-associated Y RNAs in metazoans: evolution and diversification Molecular Biology and Evolution , vol. 24 , nº 8. pp. 1678-1689. DOI: 10.1093/molbev/msm084.

Lucier, Jean-François; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319; Noël, Jean-François; Boire, Gilles et Perreault, Jean-Pierre (2007). RTAnalyzer: a web application for finding new retrotransposons and detecting L1 retrotransposition signatures Nucleic Acids Research , vol. 35 , nº Web Serv. w269-w274. DOI: 10.1093/nar/gkm313.

Nandi, Suvobroto; Shi, Bo; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et Gartenhaus, Ronald B. (2006). Characterization of the MCT-1 pseudogene: identification and implication of its location in a highly amplified region of chromosome 20 Biochimica et Biophysica Acta , vol. 1759 , nº 5. pp. 234-239. DOI: 10.1016/j.bbaexp.2006.05.003.

Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319; Noël, Jean-François; Briere, Francis; Cousineau, Benoit; Lucier, Jean-François; Perreault, Jean-Pierre et Boire, Gilles (2005). Retropseudogenes derived from the human Ro/SS-A autoantigen-associated hY RNAs Nucleic Acids Research , vol. 33 , nº 6. pp. 2032-2041. DOI: 10.1093/nar/gki504.

Deschenes, Patrick; Ouellet, Jonathan; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et Perreault, Jean-Pierre (2003). Formation of the P1.1 pseudoknot is critical for both the cleavage activity and substrate specificity of an antigenomic trans-acting hepatitis delta ribozyme Nucleic Acids Research , vol. 31 , nº 8. pp. 2087-2096. DOI: 10.1093/nar/gkg307.

Pelchat, Martin; Rocheleau, Lynda; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et Perreault, Jean-Pierre (2003). SubViral RNA: a database of the smallest known auto-replicable RNA species Nucleic Acids Research , vol. 31 , nº 1. pp. 444-445. DOI: 10.1093/nar/gkg026.

Chapitre de livre

Najeh, Sabrine; Zandi, Kasra; Djerroud, Samia; Kharma, Nawwaf et Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 (2021). Computer-Aided Design of Active Pseudoknotted Hammerhead Ribozymes In: Ribozymes: Methods and Protocols. Methods in Molecular Biology (2167). Humana Press, New York, pp. 91-111.

El Korbi, Amell; Ouellet, Jonathan; Naghdi, Mohammad Reza et Perreault, Jonathan (2014). Finding instances of riboswitches and ribozymes by homology search of structured RNA with infernal In: Therapeutic Applications of Ribozymes and Riboswitches: Methods and Protocols. Methods in Molecular Biology, 1103 (1103). Springer, New York, pp. 113-126.

Document issu d'une conférence ou d'un atelier

Mohamed, Ahmed; Walsh, Ryan; Ropagnol, Xavier; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et Ozaki, Tsuneyuki ORCID: https://orcid.org/0000-0001-8857-3900 (2021). Rapid and Sensitive Detection of Microcystin-LR using THz-Aptamer Biosensor In: 2021 46th International Conference on Infrared, Millimeter, and Terahertz Waves, 29 August 2021 - 03 September 2021, Chengdu, China.

Mohamed, Ahmed; Walsh, Ryan; Ropagnol, Xavier; Perreault, Jonathan ORCID: https://orcid.org/0000-0003-4726-6319 et Ozaki, Tsuneyuki ORCID: https://orcid.org/0000-0001-8857-3900 (2021). Rapid and Sensitive Detection of Microcystin-LR using THz-Aptamer Biosensor In: 2021 46th International Conference on Infrared, Millimeter, and Terahertz Waves, 29 August 2021 - 03 September 2021, Chengdu, China.

Chiniforooshan, Yasser; Celebanska, Anna; Janik, Monika; Mikulic, Predrag; Haddad, Fayrouz; Perreault, Jonathan et Bock, Wojtek J. (2017). Double resonance long period fiber grating for detection of E. coli in trace concentration by choosing a proper bacteriophage In: 25th International Conference on Optical Fiber Sensors, April, 24-28 2017, Jeju, South Korea.

Thamri, Amal; Létourneau, Myriam; Chatenet, David; Castonguay, Annie ORCID: https://orcid.org/0000-0001-5705-6353 et Perreault, Jonathan . Cystein-functionalization of an Antimicrobial Peptide Allows the Spontaneous Formation of a Dimer with a 30-fold Enhanced Antimicrobial Activity In: 99th Canadian Chemistry Conference and Exhibition, June 5-9, 2016, Halifax, Nouvelle-Écosse, Canada.

Naghdi, Mohammad Reza et Perreault, Jonathan . Découverte de novo d’ARN noncodants régulateurs de cations chez les procaryotes In: 8e édition, Congrès Armand-Frappier 2013, 14-16 novembre 2013, Orford (Québec).

Devinck, Aurélie; Boutet, Émilie; Ouellet, Jonathan et Perreault, Jonathan . Développement du Shifted-Reverse PolyAcrylamide Gel Electrophoresis (SR-PAGE) pour la découverte de nouveaux riboswitchs. In: Congrès Armand-Frappier 2017 (10e édition), 9-11 novembre 2017, Orford (Québec).

Korniakova, Vesta; Sellamuthu, Balasubramanian; Yang, Xiaoling; Khalfaoui, Fatma; Naghdi, Mohammad Reza et Perreault, Jonathan . Étude structurale d’un riboswitch S-adénosylméthionine (SAM) II chez Burkholderia thailandensis In: Congrès Armand-Frappier 2017 (10e édition), 9-11 novembre 2017, Orford (Québec).

Jean-Pierre, Fabrice; Séguin, Mariane; Perreault, Jonathan et Déziel, Éric . L’expression du régulateur global post-transcriptionnel RsmA s’auto-régule négativement chez le pathogène opportuniste Pseudomonas aeruginosa In: Congrès Armand-Frappier 2013, 8e édition, 14-16 novembre 2013, Orford.

Boutet, Émilie; Wade, Fallou; Imane, Roqaya et Perreault, Jonathan . Outils de régulation de l’expression génétique chez Methylobacterium extorquens basés sur l’ARN In: Congrès Armand-Frappier 2017 (10e édition), 9-11 novembre 2017, Orford (Québec).

Greschner, Andrea; Ropagnol, Xavier; Kort, Mohamed; Zuberi, Nabilah; Perreault, Jonathan; Razzari, Luca; Ozaki, Tsuneyuki et Gauthier, Marc A. . Precise orientation of thermally-sensitive biomolecules using DNA nanostructures: An exploration of non-thermal techniques for controlling DNA nanoassemblies In: 11th World Biomaterials Congress (WBC), 11-15 December 2020, virtuel.

Najeh, Sabrine; Cholley, Pierre-Étienne; El Korbi, Amell; Antony, Jon; Meyer, Michelle; Perreault, Jonathan et Castonguay, Annie ORCID: https://orcid.org/0000-0001-5705-6353 . RNAstem : une base de données pour trouver des motifs d’ARN à cibler par des petites molécules In: Congrès Armand-Frappier 2017 (10e édition), 9-11 novembre 2017, Orford (Québec).

Naghdi, Mohammad Reza et Perreault, Jonathan . Une approche de prédiction et caractérisation de nouveaux ARN noncodants conservés chez les procaryotes In: Congrès Armand-Frappier 2017 (10e édition), 9-11 novembre 2017, Orford (Québec).